1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g042552

Adi_g042552


Description : not classified & original description: none


Gene families : OG0000106 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g042552

Target Alias Description ECC score Gene Family Method Actions
Als_g41355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52700.t1 Aspi01Gene52700 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0110.g045469 No alias not classified & original description: CDS=1-264 0.02 OrthoFinder output from all 47 species
LOC_Os01g72910.1 LOC_Os01g72910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g21390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012890 No alias not classified & original description: CDS=189-458 0.02 OrthoFinder output from all 47 species
Zm00001e017612_P001 Zm00001e017612 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003496 ABA_WDS 13 85
No external refs found!