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  5. Adi_g042340

Adi_g042340


Description : not classified & original description: none


Gene families : OG0003008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g042340

Target Alias Description ECC score Gene Family Method Actions
AT4G29400 No alias Protein of unknown function (DUF3531) 0.05 OrthoFinder output from all 47 species
AT5G08400 No alias Protein of unknown function (DUF3531) 0.04 OrthoFinder output from all 47 species
Als_g08223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0207.g057900 No alias not classified & original description: CDS=92-976 0.03 OrthoFinder output from all 47 species
Ceric.07G080500.1 Ceric.07G080500 not classified & original description: pacid=50627306... 0.03 OrthoFinder output from all 47 species
Ceric.14G067200.1 Ceric.14G067200 not classified & original description: pacid=50634031... 0.03 OrthoFinder output from all 47 species
GSVIVT01015249001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01034332001 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os01g37820.1 LOC_Os01g37820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g58120.1 LOC_Os02g58120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sam_g00449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g081080.3.1 Solyc08g081080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g07574 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g19058 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023539_P002 Zm00001e023539 Homeobox-leucine zipper protein HOX32 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e027738_P003 Zm00001e027738 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021920 DUF3531 156 310
No external refs found!