Adi_g042164


Description : not classified & original description: none


Gene families : OG0000397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g042164

Target Alias Description ECC score Gene Family Method Actions
Adi_g001264 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g004320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g017729 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g123513 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g130030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36359 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g44486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29814 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g03895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g13111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14280 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g40240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54580 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g36383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!