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  5. Adi_g041932

Adi_g041932


Description : component *(LSm8) of U6-associated LSm accessory ribonucleoprotein complex & original description: none


Gene families : OG0008386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g041932

Target Alias Description ECC score Gene Family Method Actions
AT1G65700 No alias Small nuclear ribonucleoprotein family protein 0.04 OrthoFinder output from all 47 species
GSVIVT01024237001 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.03 OrthoFinder output from all 47 species
Mp4g00350.1 No alias component LSm8 of U6-associated LSm accessory... 0.02 OrthoFinder output from all 47 species
Pp3c5_26940V3.1 Pp3c5_26940 Small nuclear ribonucleoprotein family protein 0.01 OrthoFinder output from all 47 species
Zm00001e032331_P001 Zm00001e032331 component LSm8 of U6-associated LSm accessory... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 30 96
No external refs found!