Solyc12g005580.2.1 (Solyc12g005580.2)


Aliases : Solyc12g005580.2

Description : 31.4 cell.vesicle transport member of SYP12 Gene Family syntaxin of plants 124 (SYP124)


Gene families : OG_01_0000325 (Gene family) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g005580.2.1
Cluster HCCA cluster: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT1G11250 SYP125, ATSYP125 syntaxin of plants 125 0.1 Gene family
AT1G61290 ATSYP124, SYP124 syntaxin of plants 124 0.06 Gene family
AT3G03800 ATSYP131, SYP131 syntaxin of plants 131 0.05 Gene family
AT3G11820 SYP121,... syntaxin of plants 121 0.03 Gene family
AT3G52400 SYP122, ATSYP122 syntaxin of plants 122 0.02 Gene family
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.03 Gene family
GSVIVT01006716001 No alias 31.4 cell.vesicle transport member of SYP12 Gene Family... 0.02 Gene family
GSVIVT01022480001 No alias 31.4 cell.vesicle transport member of SYP13 Gene Family... 0.04 Gene family
GSVIVT01023788001 No alias 31.4 cell.vesicle transport member of SYP11 Gene Family... 0.02 Gene family
GSVIVT01030578001 No alias 31.4 cell.vesicle transport member of SYP12 Gene Family... 0.04 Gene family
LOC_Os02g11890 Os02g0209900 31.4 cell.vesicle transport member of SYP12 Gene Family... 0.02 Gene family
LOC_Os06g07200 Os06g0168500 31.4 cell.vesicle transport member of SYP13 Gene Family... 0.02 Gene family
LOC_Os07g07000 Os07g0164300 31.4 cell.vesicle transport member of SYP13 Gene Family... 0.03 Gene family
Smo151097 PACid_15414040 31.4 cell.vesicle transport member of SYP12 Gene Family... 0.01 Gene family
Solyc10g081850.2.1 Solyc10g081850.2 31.4 cell.vesicle transport Encodes a syntaxin localized... 0.03 Gene family
Zm00001d007902 GRMZM2G330772 31.4 cell.vesicle transport member of SYP13 Gene Family... 0.03 Gene family
Zm00001d018867 GRMZM2G044527 31.4 cell.vesicle transport member of SYP13 Gene Family... 0.02 Gene family
Zm00001d036931 GRMZM2G416733 31.4 cell.vesicle transport member of SYP12 Gene Family... 0.03 Gene family
Zm00001d041716 GRMZM2G021378 31.4 cell.vesicle transport member of SYP13 Gene Family... 0.06 Gene family
Zm00001d046482 GRMZM2G095441 31.4 cell.vesicle transport member of SYP12 Gene Family... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 246 296
IPR006011 Syntaxin_N 39 244
No external refs found!