Solyc12g005020.2.1 (Solyc12g005020.2)


Aliases : Solyc12g005020.2

Description : 35.1 not assigned.no ontology RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g005020.2.1
Cluster HCCA cluster: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G04790 No alias RING/U-box superfamily protein 0.02 Gene family
AT4G17905 ATL4H RING/U-box superfamily protein 0.02 Gene family
AT4G30370 No alias RING/U-box superfamily protein 0.07 Gene family
GSVIVT01022306001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os02g08200 Os02g0178600 No description available 0.02 Gene family
LOC_Os12g40460 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
MA_129306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Smo39820 PACid_15420975 No description available 0.01 Gene family
Smo8844 PACid_15408158 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc03g032060.1.1 Solyc03g032060.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
Solyc06g053640.1.1 Solyc06g053640.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc06g064440.3.1 Solyc06g064440.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d017404 GRMZM2G409372 No description available 0.01 Gene family
Zm00001d029996 GRMZM2G042538 No description available 0.01 Gene family
Zm00001d030945 GRMZM2G124423 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d045077 GRMZM2G151913 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d046145 GRMZM2G480106 No description available 0.07 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 177 220
No external refs found!