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  5. Adi_g041117

Adi_g041117


Description : regulatory protein *(GOT1) of COPII coatomer machinery & original description: none


Gene families : OG0003416 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003416_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g041117
Cluster HCCA: Cluster_367

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00130590 evm_27.TU.AmTr_v1... Vesicle transport protein GOT1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Als_g57862 No alias regulatory protein *(GOT1) of COPII coatomer machinery &... 0.02 OrthoFinder output from all 47 species
Aob_g00413 No alias regulatory protein *(GOT1) of COPII coatomer machinery &... 0.02 OrthoFinder output from all 47 species
Azfi_s0288.g063248 No alias regulatory protein *(GOT1) of COPII coatomer machinery &... 0.03 OrthoFinder output from all 47 species
Ceric.37G014300.1 Ceric.37G014300 regulatory protein *(GOT1) of COPII coatomer machinery &... 0.03 OrthoFinder output from all 47 species
GSVIVT01013545001 No alias Vesicle transport protein GOT1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Lfl_g02632 No alias regulatory protein *(GOT1) of COPII coatomer machinery &... 0.04 OrthoFinder output from all 47 species
Smo143332 No alias Vesicle transport protein GOT1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g069610.3.1 Solyc02g069610 Vesicle transport protein GOT1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007305 Vesicle_transpt_Got1/SFT2 16 115
No external refs found!