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  5. Adi_g040965

Adi_g040965 (ATPRFB, HCF109)


Aliases : ATPRFB, HCF109

Description : translation peptide chain release factor *(PrfB) & original description: none


Gene families : OG0002101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g040965
Cluster HCCA: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00184560 ATPRFB, HCF109,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT5G36170 ATPRFB, HCF109 high chlorophyll fluorescent 109 0.04 OrthoFinder output from all 47 species
Aev_g07867 No alias translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Ceric.08G069700.1 Ceric.08G069700 translation peptide chain release factor *(PrfB) &... 0.02 OrthoFinder output from all 47 species
Cre01.g010864 ATPRFB, HCF109 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dac_g33031 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.02 OrthoFinder output from all 47 species
Ehy_g09038 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01033556001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Ore_g03628 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.04 OrthoFinder output from all 47 species
Ppi_g03735 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Solyc01g100420.3.1 Solyc01g100420 PrfB-type translation peptide chain release factor 0.02 OrthoFinder output from all 47 species
Solyc04g025290.4.1 ATPRFB, HCF109,... PrfB-type translation peptide chain release factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006415 translational termination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003873 6-phosphofructo-2-kinase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006000 fructose metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000352 Pep_chain_release_fac_I 319 427
IPR005139 PCRF 118 308
No external refs found!