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  5. Adi_g040528

Adi_g040528


Description : prolyl hydroxylase & original description: none


Gene families : OG0000256 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g040528

Target Alias Description ECC score Gene Family Method Actions
AT2G43080 AT-P4H-1 P4H isoform 1 0.02 OrthoFinder output from all 47 species
AT4G33910 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 OrthoFinder output from all 47 species
Aev_g03078 No alias prolyl hydroxylase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07639 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g41271 No alias prolyl hydroxylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01300 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08897 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0100.g044293 No alias prolyl hydroxylase & original description: CDS=283-1209 0.03 OrthoFinder output from all 47 species
Azfi_s0141.g051338 No alias prolyl hydroxylase & original description: CDS=4-1092 0.03 OrthoFinder output from all 47 species
Ceric.1Z107200.1 Ceric.1Z107200 prolyl hydroxylase & original description:... 0.03 OrthoFinder output from all 47 species
Cre03.g160200 No alias Protein modification.hydroxylation.prolyl hydroxylase 0.03 OrthoFinder output from all 47 species
Ehy_g08310 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g58890.2 LOC_Os03g58890 prolyl hydroxylase 0.02 OrthoFinder output from all 47 species
LOC_Os07g09630.1 LOC_Os07g09630 prolyl hydroxylase 0.02 OrthoFinder output from all 47 species
LOC_Os10g35470.1 LOC_Os10g35470 prolyl hydroxylase 0.02 OrthoFinder output from all 47 species
Lfl_g01085 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03898 No alias prolyl hydroxylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02920 No alias prolyl hydroxylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06156 No alias prolyl hydroxylase & original description: none 0.05 OrthoFinder output from all 47 species
Solyc04g081930.3.1 Solyc04g081930 prolyl hydroxylase 0.02 OrthoFinder output from all 47 species
Spa_g24778 AT-P4H-1 prolyl hydroxylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008483_P001 AT-P4H-1, Zm00001e008483 prolyl hydroxylase 0.02 OrthoFinder output from all 47 species
Zm00001e031982_P004 Zm00001e031982 prolyl hydroxylase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043625 delta DNA polymerase complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR044862 Pro_4_hyd_alph_FE2OG_OXY 234 351
No external refs found!