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  5. Adi_g040223

Adi_g040223


Description : component *(uS5) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001457 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001457_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g040223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00212950 XW6,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
AT2G41840 No alias Ribosomal protein S5 family protein 0.03 OrthoFinder output from all 47 species
Ala_g12737 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0377.g067313 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g21907 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.30G013900.1 Ceric.30G013900 component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cre01.g039250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Mp5g05010.1 No alias component RPS2 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp5g15970.1 No alias component RPS2 of SSU proteome 0.02 OrthoFinder output from all 47 species
Ore_g03514 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ore_g17004 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Pir_g11571 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c24_5780V3.1 Pp3c24_5780 Ribosomal protein S5 family protein 0.02 OrthoFinder output from all 47 species
Smo67484 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Solyc04g063290.3.1 Solyc04g063290 component RPS2 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc04g074300.3.1 Solyc04g074300 component RPS2 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g14513 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g40249 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g47984 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g57025 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g01630 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 92 156
IPR005324 Ribosomal_S5_C 176 205
No external refs found!