Adi_g039314 (CYCA2;1)


Aliases : CYCA2;1

Description : not classified & original description: none


Gene families : OG0001097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001097_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g039314

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272790 CYCA3;1,... Cell cycle.regulation.cyclins.CYCA-type cyclin 0.06 OrthoFinder output from all 47 species
AMTR_s00048p00184670 CYCA2;4,... Cell cycle.regulation.cyclins.CYCA-type cyclin 0.02 OrthoFinder output from all 47 species
AMTR_s00068p00198800 CYCA1;1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.06 OrthoFinder output from all 47 species
AT1G44110 CYCA1;1 Cyclin A1;1 0.02 OrthoFinder output from all 47 species
AT5G43080 CYCA3;1 Cyclin A3;1 0.05 OrthoFinder output from all 47 species
Adi_g032026 CYCA1;1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g16144 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.05 OrthoFinder output from all 47 species
Ala_g21059 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.08 OrthoFinder output from all 47 species
Ala_g23638 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.07 OrthoFinder output from all 47 species
Ala_g25625 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.06 OrthoFinder output from all 47 species
Als_g03751 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.09 OrthoFinder output from all 47 species
Als_g14283 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Als_g52746 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Aob_g29454 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.06 OrthoFinder output from all 47 species
Aop_g01772 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.07 OrthoFinder output from all 47 species
Aop_g04287 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Aop_g19060 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.08 OrthoFinder output from all 47 species
Aspi01Gene15105.t1 CYCA1;1, Aspi01Gene15105 regulatory protein *(TAM) involved in metaphase to... 0.05 OrthoFinder output from all 47 species
Aspi01Gene18499.t1 CYCA1;1, Aspi01Gene18499 regulatory protein *(TAM) involved in metaphase to... 0.07 OrthoFinder output from all 47 species
Azfi_s0003.g008079 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010440 CYCA1;1 not classified & original description: CDS=585-2150 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g016140 CYCA1;1 not classified & original description: CDS=307-1776 0.04 OrthoFinder output from all 47 species
Azfi_s0051.g031411 CYCA1;1 not classified & original description: CDS=319-1644 0.03 OrthoFinder output from all 47 species
Cba_g21394 CYCA1;1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.26G030100.1 CYCA1;1, Ceric.26G030100 regulatory protein *(TAM) involved in metaphase to... 0.05 OrthoFinder output from all 47 species
Ceric.30G011000.1 CYCA1;1, Ceric.30G011000 regulatory protein *(TAM) involved in metaphase to... 0.06 OrthoFinder output from all 47 species
Ceric.33G050700.1 CYCA1;1, Ceric.33G050700 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000076.67 CYCA1;1 Cyclin-A2-1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Cre03.g207900 CYCA1;1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.01 OrthoFinder output from all 47 species
Dac_g04219 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.09 OrthoFinder output from all 47 species
Dac_g11514 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.08 OrthoFinder output from all 47 species
Dac_g13212 CYCA1;1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g04793 CYC3B, CYCA2;2, CYC2BAT regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Dcu_g12296 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.06 OrthoFinder output from all 47 species
Dcu_g31687 CYCA1;1 regulatory protein *(CYCA) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dde_g11191 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.09 OrthoFinder output from all 47 species
GSVIVT01008823001 CYCA1;1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.04 OrthoFinder output from all 47 species
GSVIVT01009399001 CYCA3;1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.06 OrthoFinder output from all 47 species
GSVIVT01035718001 CYC3B, CYCA2;2, CYC2BAT Cell cycle.regulation.cyclins.CYCA-type cyclin 0.08 OrthoFinder output from all 47 species
Gb_03779 CYC3B, CYCA2;2, CYC2BAT cyclin (CYCA) 0.05 OrthoFinder output from all 47 species
Gb_07594 CYC3B, CYCA2;2, CYC2BAT cyclin (CYCA) 0.05 OrthoFinder output from all 47 species
Gb_10619 CYCA1;1 cyclin (CYCA) 0.02 OrthoFinder output from all 47 species
LOC_Os01g13260.1 CYCA1;1, LOC_Os01g13260 cyclin (CYCA) 0.04 OrthoFinder output from all 47 species
LOC_Os03g41100.1 CYCA3;1, LOC_Os03g41100 cyclin (CYCA) 0.1 OrthoFinder output from all 47 species
LOC_Os12g31810.1 CYCA2;4, LOC_Os12g31810 cyclin (CYCA) 0.03 OrthoFinder output from all 47 species
LOC_Os12g39210.1 CYCA3;4, LOC_Os12g39210 cyclin (CYCA) 0.04 OrthoFinder output from all 47 species
Len_g08312 CYC3B, CYCA2;2, CYC2BAT regulatory protein *(CYCA) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Len_g21318 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Lfl_g27348 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.06 OrthoFinder output from all 47 species
Lfl_g27435 CYCA1;1 regulatory protein *(CYCA) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Lfl_g39997 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.05 OrthoFinder output from all 47 species
MA_103138g0010 CYCA1;1 cyclin (CYCA) 0.02 OrthoFinder output from all 47 species
MA_28323g0010 CYC3B, CYCA2;2, CYC2BAT cyclin (CYCA) 0.05 OrthoFinder output from all 47 species
MA_6619g0010 CYCA1;1 cyclin (CYCA) 0.04 OrthoFinder output from all 47 species
MA_88982g0010 CYC3B, CYCA2;2, CYC2BAT cyclin (CYCA) 0.05 OrthoFinder output from all 47 species
Mp2g25500.1 CYCA1;1 cyclin (CYCA) 0.02 OrthoFinder output from all 47 species
Msp_g10135 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.08 OrthoFinder output from all 47 species
Msp_g12560 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.11 OrthoFinder output from all 47 species
Msp_g31552 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Nbi_g06697 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.07 OrthoFinder output from all 47 species
Nbi_g16546 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Nbi_g24493 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.06 OrthoFinder output from all 47 species
Ppi_g05200 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.06 OrthoFinder output from all 47 species
Ppi_g07555 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Ppi_g31211 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.05 OrthoFinder output from all 47 species
Sam_g12488 No alias regulatory protein *(TAM) involved in metaphase to... 0.07 OrthoFinder output from all 47 species
Sam_g12489 No alias regulatory protein *(TAM) involved in metaphase to... 0.08 OrthoFinder output from all 47 species
Sam_g28585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51377 No alias regulatory protein *(TAM) involved in metaphase to... 0.06 OrthoFinder output from all 47 species
Smo442428 CYCA1;1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 OrthoFinder output from all 47 species
Smo97411 CYCA1;1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 OrthoFinder output from all 47 species
Solyc04g078310.3.1 CYCA3;1, Solyc04g078310 cyclin (CYCA) 0.03 OrthoFinder output from all 47 species
Solyc06g065680.3.1 CYCA2;4, Solyc06g065680 cyclin (CYCA) 0.04 OrthoFinder output from all 47 species
Solyc12g088470.3.1 CYCA3;1, Solyc12g088470 cyclin (CYCA) 0.06 OrthoFinder output from all 47 species
Solyc12g088500.2.1 CYCA3;1, Solyc12g088500 cyclin (CYCA) 0.04 OrthoFinder output from all 47 species
Solyc12g088520.2.1 CYCA3;1, Solyc12g088520 cyclin (CYCA) 0.04 OrthoFinder output from all 47 species
Spa_g11240 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.1 OrthoFinder output from all 47 species
Spa_g11241 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.06 OrthoFinder output from all 47 species
Spa_g11267 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.06 OrthoFinder output from all 47 species
Spa_g30899 CYCA1;1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g03369 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.09 OrthoFinder output from all 47 species
Tin_g30126 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.07 OrthoFinder output from all 47 species
Zm00001e003049_P002 CYCA3;1, Zm00001e003049 cyclin (CYCA) 0.02 OrthoFinder output from all 47 species
Zm00001e005138_P001 CYCA3;1, Zm00001e005138 cyclin (CYCA) 0.05 OrthoFinder output from all 47 species
Zm00001e017335_P001 CYCA1;1, Zm00001e017335 cyclin (CYCA) 0.03 OrthoFinder output from all 47 species
Zm00001e017993_P001 CYCA3;1, Zm00001e017993 cyclin (CYCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 35 123
IPR006671 Cyclin_N 1 33
No external refs found!