Solyc11g069580.2.1 (Solyc11g069580.2)


Aliases : Solyc11g069580.2

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 15 (CNGC15)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc11g069580.2.1
Cluster HCCA cluster: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
AT1G15990 CNGC7, ATCNGC7 cyclic nucleotide gated channel 7 0.03 Gene family
AT2G28260 CNGC15, ATCNGC15 cyclic nucleotide-gated channel 15 0.03 Gene family
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.04 Gene family
AT2G46440 CNGC11, ATCNGC11 cyclic nucleotide-gated channels 0.02 Gene family
AT2G46450 ATCNGC12, CNGC12 cyclic nucleotide-gated channel 12 0.03 Gene family
AT3G17690 CNGC19, ATCNGC19 cyclic nucleotide gated channel 19 0.05 Gene family
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.02 Gene family
AT4G30360 ATCNGC17, CNGC17 cyclic nucleotide-gated channel 17 0.03 Gene family
Cpa|evm.model.tig00000851.5 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
GSVIVT01029407001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
LOC_Os06g08850 Os06g0188000 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc03g098210.3.1 Solyc03g098210.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc05g050350.2.1 Solyc05g050350.2 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc05g050360.3.1 Solyc05g050360.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
Solyc05g050380.3.1 Solyc05g050380.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d002099 GRMZM2G023037 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d013243 GRMZM5G858887 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d021388 GRMZM2G135651 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d037035 GRMZM2G129375,... 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 90 409
No external refs found!