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  5. MA_10434586g0010

MA_10434586g0010


Description : protein factor PRPF4 of U4/U6 small nuclear ribonucleoprotein particle (snRNP)


Gene families : OG_01_0005235 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005235_tree ,
OG_02_0005836 (LandPlants) Phylogenetic Tree(s): OG_02_0005836_tree ,
OG_03_0007206 (SeedPlants) Phylogenetic Tree(s): OG_03_0007206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434586g0010
Cluster HCCA: Cluster_510

Target Alias Description ECC score Gene Family Method Actions
Cre16.g662800 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 Archaeplastida
Gb_29005 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.02 Archaeplastida
Gb_29006 No alias U4/U6 small nuclear ribonucleoprotein PRP4-like protein... 0.03 Archaeplastida
LOC_Os03g23935.1 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.04 Archaeplastida
Mp1g10730.1 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.01 Archaeplastida
Mp1g23970.1 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.02 Archaeplastida
Pp3c9_11970V3.1 No alias WD-40 repeat family protein / small nuclear... 0.03 Archaeplastida
Zm00001e001685_P005 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.03 Archaeplastida
Gb_29006 No alias U4/U6 small nuclear ribonucleoprotein PRP4-like protein... 0.02 LandPlants
Mp1g10730.1 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.01 LandPlants
Pp3c9_11970V3.1 No alias WD-40 repeat family protein / small nuclear... 0.03 LandPlants
Solyc04g016510.3.1 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.02 LandPlants
Zm00001e001685_P005 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.02 LandPlants
AT2G41500 EMB2776, LIS WD-40 repeat family protein / small nuclear... 0.01 SeedPlants
LOC_Os03g23935.1 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.01 SeedPlants
Solyc04g016510.3.1 No alias protein factor PRPF4 of U4/U6 small nuclear... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 557 591
IPR001680 WD40_repeat 429 466
IPR001680 WD40_repeat 518 549
IPR001680 WD40_repeat 471 507
IPR014906 PRP4-like 263 291
No external refs found!