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  5. Ehy_g11115

Ehy_g11115


Description : pre-rRNA cleavage factor involved in ITS1 rRNA removal *(SLX9/SAHY) & original description: none


Gene families : OG0006511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g11115

Target Alias Description ECC score Gene Family Method Actions
Aop_g70322 No alias pre-rRNA cleavage factor involved in ITS1 rRNA removal... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA Interproscan
CC GO:0005730 nucleolus IEA Interproscan
CC GO:0030686 90S preribosome IEA Interproscan
CC GO:0030688 preribosome, small subunit precursor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0061666 UFM1 ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR028160 Slx9-like 51 162
No external refs found!