1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g033571

Adi_g033571 (TGA2, AHBP-1B)


Aliases : TGA2, AHBP-1B

Description : TGA-type transcription factor & original description: none


Gene families : OG0000342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g033571

Target Alias Description ECC score Gene Family Method Actions
Ala_g17008 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g10259 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g15547 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04792 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g06080 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Ore_g30054 bZIP21, TGA9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19018 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g01303 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g14907 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011226 TGA2, AHBP-1B TGA-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0205.g025720 TGA2, AHBP-1B TGA-type transcription factor & original description: CDS=82-1137 0.02 OrthoFinder output from all 47 species
Solyc10g080410.3.1 TGA10, bZIP65,... transcription factor (bZIP). transcription factor (TGA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!