MA_10434055g0010


Description : cohesin cofactor (PDS5)


Gene families : OG_01_0000410 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000410_tree ,
OG_02_0002118 (LandPlants) Phylogenetic Tree(s): OG_02_0002118_tree ,
OG_03_0002144 (SeedPlants) Phylogenetic Tree(s): OG_03_0002144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434055g0010
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00213120 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.03 Archaeplastida
AMTR_s00065p00174980 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.sister chromatid... 0.02 Archaeplastida
AT1G15940 No alias Tudor/PWWP/MBT superfamily protein 0.02 Archaeplastida
AT1G77600 No alias ARM repeat superfamily protein 0.03 Archaeplastida
AT4G31880 No alias LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant... 0.05 Archaeplastida
AT5G47690 No alias binding 0.05 Archaeplastida
Cre01.g032550 No alias No description available 0.01 Archaeplastida
GSVIVT01002731001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 Archaeplastida
GSVIVT01002824001 No alias No description available 0.03 Archaeplastida
GSVIVT01023587001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.02 Archaeplastida
GSVIVT01035890001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 Archaeplastida
Gb_09525 No alias cohesin cofactor (PDS5) 0.08 Archaeplastida
Gb_23673 No alias cohesin cofactor (PDS5) 0.05 Archaeplastida
LOC_Os04g25960.1 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
LOC_Os06g17840.1 No alias cohesin cofactor (PDS5) 0.06 Archaeplastida
Mp3g13850.1 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
Pp3c10_24900V3.1 No alias binding 0.04 Archaeplastida
Pp3c20_23000V3.1 No alias binding 0.03 Archaeplastida
Pp3c23_10270V3.1 No alias binding 0.04 Archaeplastida
Solyc03g116970.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc11g012770.2.1 No alias cohesin cofactor (PDS5) 0.04 Archaeplastida
Zm00001e015094_P002 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
Zm00001e030989_P001 No alias cohesin cofactor (PDS5) 0.04 Archaeplastida
Zm00001e036853_P003 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
AT5G47690 No alias binding 0.02 LandPlants
GSVIVT01002731001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 LandPlants
Gb_12481 No alias cohesin cofactor (PDS5) 0.03 LandPlants
Gb_23673 No alias cohesin cofactor (PDS5) 0.04 LandPlants
LOC_Os06g17840.1 No alias cohesin cofactor (PDS5) 0.03 LandPlants
Pp3c10_24900V3.1 No alias binding 0.02 LandPlants
Pp3c20_23000V3.1 No alias binding 0.02 LandPlants
Pp3c23_10270V3.1 No alias binding 0.03 LandPlants
Solyc11g012770.2.1 No alias cohesin cofactor (PDS5) 0.04 LandPlants
Zm00001e019139_P001 No alias cohesin cofactor (PDS5) 0.01 LandPlants
Zm00001e030989_P001 No alias cohesin cofactor (PDS5) 0.04 LandPlants
Zm00001e036853_P003 No alias cohesin cofactor (PDS5) 0.02 LandPlants
AT5G47690 No alias binding 0.02 SeedPlants
GSVIVT01002731001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 SeedPlants
Gb_12481 No alias cohesin cofactor (PDS5) 0.03 SeedPlants
Gb_23673 No alias cohesin cofactor (PDS5) 0.04 SeedPlants
LOC_Os06g17840.1 No alias cohesin cofactor (PDS5) 0.03 SeedPlants
Solyc11g012770.2.1 No alias cohesin cofactor (PDS5) 0.04 SeedPlants
Zm00001e019139_P001 No alias cohesin cofactor (PDS5) 0.01 SeedPlants
Zm00001e030989_P001 No alias cohesin cofactor (PDS5) 0.04 SeedPlants
Zm00001e036853_P003 No alias cohesin cofactor (PDS5) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!