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MA_10433850g0010


Description : pre-mRNA-processing protein (PRP40A/B)


Gene families : OG_01_0002768 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002768_tree ,
OG_02_0032532 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0011790 (SeedPlants) Phylogenetic Tree(s): OG_03_0011790_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433850g0010
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00227470 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
AT1G44910 ATPRP40A, PRP40A pre-mRNA-processing protein 40A 0.03 Archaeplastida
AT3G19670 ATPRP40B, PRP40B pre-mRNA-processing protein 40B 0.04 Archaeplastida
Cre07.g351000 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.01 Archaeplastida
GSVIVT01009302001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.1 Archaeplastida
Mp2g00410.1 No alias pre-mRNA-processing protein (PRP40A/B) 0.08 Archaeplastida
Smo402621 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
Solyc07g022760.4.1 No alias pre-mRNA-processing protein (PRP40A/B) 0.03 Archaeplastida
Zm00001e020775_P002 No alias pre-mRNA-processing protein (PRP40A/B) 0.02 Archaeplastida
Zm00001e020778_P001 No alias pre-mRNA-processing protein (PRP40A/B) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001202 WW_dom 213 238
IPR002713 FF_domain 519 569
IPR002713 FF_domain 452 501
No external refs found!