Solyc11g028020.2.1 (Solyc11g028020.2)


Aliases : Solyc11g028020.2

Description : 27.3.24 RNA.regulation of transcription.MADS box transcription factor family a MADS box transcription factor expressed in the carpel and ovules SEEDSTICK (STK)


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc11g028020.2.1
Cluster HCCA cluster: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT1G77950 AGL67 AGAMOUS-like 67 0.02 Gene family
AT2G22540 SVP, AGL22 K-box region and MADS-box transcription factor family protein 0.03 Gene family
AT5G65070 FCL4, AGL69, MAF4 K-box region and MADS-box transcription factor family protein 0.02 Gene family
GSVIVT01008140001 No alias 33.99 development.unspecified MADS box gene negatively... 0.02 Gene family
LOC_Os02g49840 Os02g0731200 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os06g06750 Os06g0162800 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os07g01820 Os07g0108900 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
Solyc04g078300.3.1 Solyc04g078300.3 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 83 171
No external refs found!