Solyc11g020810.2.1 (Solyc11g020810.2)


Aliases : Solyc11g020810.2

Description : 29.2.2.3.3 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.methylotransferases FtsJ-like methyltransferase family protein


Gene families : OG_01_0003762 (Gene family) Phylogenetic Tree(s): OG0003762_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc11g020810.2.1
Cluster HCCA cluster: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT4G25730 No alias FtsJ-like methyltransferase family protein 0.2 Gene family
Cpa|evm.model.tig00000217.16 No alias 29.2.2.3.3 protein.synthesis.ribosome... 0.04 Gene family
Cre12.g529500 No alias 29.2.2.3.3 protein.synthesis.ribosome... 0.19 Gene family
GSVIVT01023801001 No alias 29.2.2.3.3 protein.synthesis.ribosome... 0.1 Gene family
LOC_Os05g49230 Os05g0567400 29.2.2.3.3 protein.synthesis.ribosome... 0.1 Gene family
Smo141188 PACid_15407353 No description available 0.03 Gene family
Smo404107 PACid_15407688 No description available 0.08 Gene family
Smo78506 PACid_15422107 No description available 0.03 Gene family
Zm00001d009597 GRMZM2G158091 29.2.2.3.3 protein.synthesis.ribosome... 0.02 Gene family
Zm00001d039047 GRMZM2G128579 29.2.2.3.3 protein.synthesis.ribosome... 0.2 Gene family

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA InterProScan
BP GO:0032259 methylation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR024576 rRNA_MeTfrase_Spb1_DUF3381 234 385
IPR012920 rRNA_MeTfrase_Spb1_C 602 799
IPR002877 rRNA_MeTrfase_FtsJ_dom 22 199
No external refs found!