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  5. Ehy_g10488

Ehy_g10488


Description : not classified & original description: none


Gene families : OG0000677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g10488

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00222730 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00082900 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g09626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07392 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13057 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G058800.1 Ceric.04G058800 not classified & original description: pacid=50631350... 0.03 OrthoFinder output from all 47 species
Dac_g16369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_14149 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_21243 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_26190 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_38984 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os10g08570.1 LOC_Os10g08570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g09447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427644g0030 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10436637g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10436637g0030 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_169053g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_8142g0020 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g03804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08252 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g12919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 257 315
IPR000504 RRM_dom 433 492
IPR000504 RRM_dom 336 400
No external refs found!