Aliases : UPL1
Description : not classified & original description: none
Gene families : OG0001042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00033p00211330 | UPL1,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00061p00204480 | UPL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
AT1G55860 | UPL1 | ubiquitin-protein ligase 1 | 0.05 | OrthoFinder output from all 47 species | |
AT1G70320 | UPL2 | ubiquitin-protein ligase 2 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g005409 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g036157 | UPL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g049236 | UPL1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Adi_g060512 | UPL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g067762 | UPL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g076223 | UPL2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Adi_g076224 | UPL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g084258 | UPL1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aev_g04900 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g06583 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g06863 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g14108 | UPL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g16302 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g27017 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g26360 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0029.g024164 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: CDS=1-11178 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0116.g046399 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: CDS=235-11562 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.29G011900.1 | UPL1, Ceric.29G011900 | E3 ubiquitin ligase *(UPL1) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Cre01.g012450 | UPL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g02070 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g12771 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01009206001 | UPL2 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01009208001 | UPL2 | E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01014697001 | UPL1 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Gb_17424 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.05 | OrthoFinder output from all 47 species | |
Gb_21632 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os12g24080.1 | UPL2, LOC_Os12g24080 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
Len_g22981 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Len_g23822 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_20049g0010 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
MA_7295g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_7295g0020 | UPL2 | E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g19139 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g48585 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g13587 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g15570 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pir_g20483 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g02429 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g06511 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Smo154179 | UPL2 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g076620.4.1 | UPL1, Solyc04g076620 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g065630.4.1 | UPL1, Solyc07g065630 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g17792 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g28076 | UPL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29717 | UPL1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g33388 | UPL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g40173 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e017836_P002 | UPL1, Zm00001e017836 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006396 | RNA processing | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |