Solyc11g017370.2.1 (Solyc11g017370.2)


Aliases : Solyc11g017370.2

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0010399 (Gene family) Phylogenetic Tree(s): OG0010399_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc11g017370.2.1
Cluster HCCA cluster: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT3G22150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.13 Gene family
LOC_Os04g51350 Os04g0602600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
Zm00001d002421 GRMZM2G456123 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 321 346
IPR002885 Pentatricopeptide_repeat 522 569
IPR002885 Pentatricopeptide_repeat 105 154
IPR002885 Pentatricopeptide_repeat 623 670
IPR002885 Pentatricopeptide_repeat 421 466
IPR002885 Pentatricopeptide_repeat 214 255
No external refs found!