1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g025539

Adi_g025539 (EMB3012)


Aliases : EMB3012

Description : nucleoporin of nuclear pore complex *(GP210) & original description: none


Gene families : OG0005031 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g025539

Target Alias Description ECC score Gene Family Method Actions
Ala_g04222 EMB3012 nucleoporin of nuclear pore complex *(GP210) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g05759 EMB3012 nucleoporin of nuclear pore complex *(GP210) & original... 0.02 OrthoFinder output from all 47 species
MA_896780g0010 EMB3012 Nuclear pore complex protein GP210 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g10071 EMB3012 nucleoporin of nuclear pore complex *(GP210) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g09499 EMB3012 nucleoporin of nuclear pore complex *(GP210) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g070810.4.1 EMB3012, Solyc02g070810 GP210 nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Spa_g10547 EMB3012 nucleoporin of nuclear pore complex *(GP210) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e009488_P002 EMB3012, Zm00001e009488 GP210 nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!