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  5. Adi_g024932

Adi_g024932 (ATHMG, HMG, SSRP1, NFD)


Aliases : ATHMG, HMG, SSRP1, NFD

Description : component *(SSRP) of FACT histone chaperone complex & original description: none


Gene families : OG0003187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g024932

Target Alias Description ECC score Gene Family Method Actions
Aev_g30225 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Als_g07406 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.04 OrthoFinder output from all 47 species
Aob_g07382 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.05 OrthoFinder output from all 47 species
Aop_g01350 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024680 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g06083 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g08970.1 ATHMG, HMG,... component SSRP of FACT histone chaperone complex 0.02 OrthoFinder output from all 47 species
Lfl_g23162 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.05 OrthoFinder output from all 47 species
MA_98273g0010 ATHMG, HMG, SSRP1, NFD component SSRP of FACT histone chaperone complex 0.02 OrthoFinder output from all 47 species
Nbi_g13133 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Ore_g01090 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.02 OrthoFinder output from all 47 species
Sam_g34124 No alias component *(SSRP) of FACT histone chaperone complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 602 670
IPR024954 SSRP1_DD 144 212
IPR035417 SSRP1/POB3_N 57 135
IPR013719 RTT106/SPT16-like_middle_dom 387 480
No external refs found!