Description : regulatory RNA helicase *(RH20/RH30) of virus replication & original description: none
Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00064p00050700 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00096p00079870 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AT5G14610 | No alias | DEAD box RNA helicase family protein | 0.02 | OrthoFinder output from all 47 species | |
Als_g18220 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g22206 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g11417 | No alias | regulatory RNA helicase *(RH20/RH30) of virus... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene49178.t1 | ATDRH1, DRH1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g10539 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g25686 | No alias | regulatory RNA helicase *(RH20/RH30) of virus... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g17995 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_23629 | No alias | pre-mRNA splicing regulator (DDX5) | 0.02 | OrthoFinder output from all 47 species | |
Gb_35545 | ATDRH1, DRH1 | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g07740.1 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g10050.2 | LOC_Os01g10050 | pre-mRNA splicing regulator (DDX5) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g36860.1 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os11g46240.1 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05034 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_5118g0010 | ATDRH1, DRH1 | ATP-dependent RNA helicase-like protein DB10... | 0.02 | OrthoFinder output from all 47 species | |
Mp3g07940.1 | No alias | pre-mRNA splicing regulator (DDX5) | 0.02 | OrthoFinder output from all 47 species | |
Sam_g29066 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g057760.4.1 | Solyc01g057760 | DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g112350.4.1 | Solyc03g112350 | pre-mRNA splicing regulator (DDX5) | 0.04 | OrthoFinder output from all 47 species | |
Tin_g09726 | No alias | regulatory RNA helicase *(RH20/RH30) of virus... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e011376_P001 | Zm00001e011376 | ATP-dependent RNA helicase-like protein DB10... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | HCCA |
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006873 | cellular monoatomic ion homeostasis | IEP | HCCA |
BP | GO:0006874 | cellular calcium ion homeostasis | IEP | HCCA |
BP | GO:0006875 | cellular metal ion homeostasis | IEP | HCCA |
BP | GO:0006887 | exocytosis | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007051 | spindle organization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | HCCA |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0022402 | cell cycle process | IEP | HCCA |
MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0030003 | cellular monoatomic cation homeostasis | IEP | HCCA |
CC | GO:0030289 | protein phosphatase 4 complex | IEP | HCCA |
BP | GO:0031023 | microtubule organizing center organization | IEP | HCCA |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
MF | GO:0032266 | phosphatidylinositol-3-phosphate binding | IEP | HCCA |
BP | GO:0032469 | endoplasmic reticulum calcium ion homeostasis | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
CC | GO:0033179 | proton-transporting V-type ATPase, V0 domain | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
BP | GO:0042592 | homeostatic process | IEP | HCCA |
MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | HCCA |
BP | GO:0048878 | chemical homeostasis | IEP | HCCA |
BP | GO:0050801 | monoatomic ion homeostasis | IEP | HCCA |
BP | GO:0051225 | spindle assembly | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0055065 | metal ion homeostasis | IEP | HCCA |
BP | GO:0055074 | calcium ion homeostasis | IEP | HCCA |
BP | GO:0055080 | monoatomic cation homeostasis | IEP | HCCA |
BP | GO:0055082 | cellular chemical homeostasis | IEP | HCCA |
BP | GO:0070925 | organelle assembly | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | HCCA |
MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | HCCA |
BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
No external refs found! |