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  5. Adi_g024370

Adi_g024370


Description : not classified & original description: none


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g024370
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00251380 evm_27.TU.AmTr_v1... Protein BPS1, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00110690 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00052950 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G43630 No alias Protein of unknown function (DUF793) 0.02 OrthoFinder output from all 47 species
AT3G61500 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g084369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G030000.1 Ceric.22G030000 not classified & original description: pacid=50614551... 0.06 OrthoFinder output from all 47 species
Dac_g34503 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g42208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17649 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06125 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_123240g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_16561g0010 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_85744g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g10004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g31415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09452 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g00821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023340 BPS1 not classified & original description: CDS=1-1071 0.03 OrthoFinder output from all 47 species
Sam_g10143 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g071480.1.1 Solyc04g071480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g081520.1.1 ROH1, Solyc08g081520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g38799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 209 348
IPR008511 ROH1-like 44 206
No external refs found!