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  5. Adi_g024353

Adi_g024353


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g024353

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00116980 evm_27.TU.AmTr_v1... U-box domain-containing protein 62 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g02549 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18142 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11530 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18599 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01219 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05312 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.39G022700.1 Ceric.39G022700 not classified & original description: pacid=50583179... 0.03 OrthoFinder output from all 47 species
Dcu_g47007 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10909 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032672001 No alias U-box domain-containing protein 62 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g60140.1 LOC_Os03g60140 U-box domain-containing protein 62 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g19872 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15259 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37224 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04513 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14308 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011861 No alias E3 ubiquitin ligase & original description: CDS=473-2341 0.02 OrthoFinder output from all 47 species
Sam_g12559 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Smo442518 No alias U-box domain-containing protein 62 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g50858 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23558 No alias E3 ubiquiTin ligase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!