Adi_g024167 (ATARFA1B, ARFA1B)

Aliases : ATARFA1B, ARFA1B

Description : ARF-GTPase *(ARF1) & original description: none

Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g024167

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00209290	ATARFA1B, ARFA1B	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.02	OrthoFinder output from all 47 species
AT1G10630	ATARFA1F, ARFA1F	ADP-ribosylation factor A1F	0.05	OrthoFinder output from all 47 species
AT1G70490	ARFA1D, ATARFA1D	Ras-related small GTP-binding family protein	0.03	OrthoFinder output from all 47 species
AT2G47170	ARF1A1C	Ras-related small GTP-binding family protein	0.02	OrthoFinder output from all 47 species
Ala_g06715	ATARF1, ARF1,...	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g11192	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g07699	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g34615	ATARFA1F, ARFA1F	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene62840.t1	ATARFA1B,...	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g31560	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.09G076800.1	ATARFA1B,...	ARF-GTPase *(ARF1) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.25G015600.1	ATARFA1B,...	ARF-GTPase *(ARF1) & original description:...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021127.129	ARFA1E, ATARFA1E	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.02	OrthoFinder output from all 47 species
Cre12.g487850	ATARFB1B, ARFB1B	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.01	OrthoFinder output from all 47 species
Dcu_g08383	ATARFA1F, ARFA1F	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g05453	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g07364	ARF1A1C	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g17402	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26837	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01017654001	ATARFA1F, ARFA1F	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
GSVIVT01028179001	ARFA1E, ATARFA1E	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
Gb_07391	ATARFA1F, ARFA1F	ARF-GTPase	0.02	OrthoFinder output from all 47 species
LOC_Os03g59740.1	ATARFA1B,...	ARF-GTPase	0.02	OrthoFinder output from all 47 species
LOC_Os07g12170.1	ARF1A1C, LOC_Os07g12170	ARF-GTPase	0.02	OrthoFinder output from all 47 species
LOC_Os07g12200.1	ARF1A1C, LOC_Os07g12200	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Lfl_g05175	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g23069	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g31478	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
MA_9371872g0010	ATARL1, ARF3, ARL1	ADP-ribosylation factor 1 OS=Brassica rapa subsp....	0.02	OrthoFinder output from all 47 species
Mp7g13050.1	ATARFA1F, ARFA1F	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Msp_g20906	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g25108	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g40990	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g02141	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c10_20740V3.1	ARFA1E,...	ADP-ribosylation factor A1E	0.02	OrthoFinder output from all 47 species
Pp3c12_14940V3.1	ARFA1E,...	ADP-ribosylation factor A1E	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000285	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: CDS=1-882	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020267	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: CDS=156-554	0.02	OrthoFinder output from all 47 species
Solyc01g100860.3.1	ARFA1E,...	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Solyc03g096910.3.1	ATARFB1C,...	ARF-GTPase	0.03	OrthoFinder output from all 47 species
Solyc04g025560.4.1	ARFA1E,...	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Spa_g16801	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e025541_P003	ATARFA1F,...	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Zm00001e033127_P003	ARF1A1C, Zm00001e033127	ARF-GTPase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	HCCA
BP	GO:0007264	small GTPase mediated signal transduction	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016409	palmitoyltransferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	5	135

External Links

No external refs found!

Adi_g024167 (ATARFA1B, ARFA1B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation