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  5. Ehy_g10153

Ehy_g10153 (AtELP2, ELP2)


Aliases : AtELP2, ELP2

Description : component *(ELP2) of ELONGATOR transcription elongation complex & original description: none


Gene families : OG0007240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g10153

Target Alias Description ECC score Gene Family Method Actions
Ala_g22593 AtELP2, ELP2 component *(ELP2) of ELONGATOR transcription elongation... 0.02 OrthoFinder output from all 47 species
Cba_g14027 AtELP2, ELP2 component *(ELP2) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
Ceric.08G053100.1 AtELP2, ELP2,... component *(ELP2) of ELONGATOR transcription elongation... 0.04 OrthoFinder output from all 47 species
MA_55475g0010 AtELP2, ELP2 component ELP2 of ELONGATOR transcription elongation complex 0.01 OrthoFinder output from all 47 species
Mp8g01670.1 AtELP2, ELP2 component ELP2 of ELONGATOR transcription elongation complex 0.02 OrthoFinder output from all 47 species
Solyc06g008310.3.1 AtELP2, ELP2,... component ELP2 of ELONGATOR transcription elongation complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 398 434
IPR001680 WD40_repeat 112 145
IPR001680 WD40_repeat 43 93
IPR001680 WD40_repeat 677 712
IPR001680 WD40_repeat 210 250
IPR001680 WD40_repeat 292 338
No external refs found!