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Aliases : PMH1, ATRH9
Description : not classified & original description: none
Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00126p00110160 | PMH2, ATRH53,... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G26742 | emb1138 | DEAD box RNA helicase (RH3) | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g22353 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g07437 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g26679 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g15554 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g04482 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023578 | emb1138 | not classified & original description: CDS=239-2545 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0166.g054407 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11616 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g45347 | emb1138 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G054100.1 | emb1138, Ceric.05G054100 | group-II intron splicing RNA helicase *(RH3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000093.151 | emb1138 | DEAD-box ATP-dependent RNA helicase 3A, chloroplastic OS=Zea mays | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g04423 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07831 | PRH75 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000821001 | PMH2, ATRH53 | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_04849 | emb1138 | RH3 plastidial RNA basal splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| Gb_10087 | PMH2, ATRH53 | DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g12708 | emb1138 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g56603 | emb1138 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g10151 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10206082g0010 | PMH2, ATRH53 | RNA helicase (PMH) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g07724 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g22012 | emb1138 | sRNA cargo-loading helicase *(RH11/37) of extracellular... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06285 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g29256 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g19369 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19704 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g13008 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0230.g026421 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g09733 | No alias | group-II intron splicing RNA helicase *(RH3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g006320.3.1 | PMH2, ATRH53,... | RNA helicase (PMH) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g06691 | emb1138 | group-II intron splicing RNA helicase *(RH3) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g17328 | emb1138 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g40629 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| BP | GO:0006813 | potassium ion transport | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |