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  5. Adi_g023224

Adi_g023224


Description : not classified & original description: none


Gene families : OG0001026 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g023224

Target Alias Description ECC score Gene Family Method Actions
AT4G28770 No alias Tetraspanin family protein 0.02 OrthoFinder output from all 47 species
Ala_g11184 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30118 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08943 TOM2A not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g15963 TOM2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g06250.1 TOM2A, LOC_Os08g06250 Tobamovirus multiplication protein 2A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os08g18044.2 TOM2A, LOC_Os08g18044 TOM2A tobamovirus multiplication replication host factor 0.04 OrthoFinder output from all 47 species
MA_10426146g0010 No alias Tetraspanin-20 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g23989 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012928 No alias not classified & original description: CDS=25-411 0.02 OrthoFinder output from all 47 species
Smo228108 No alias Tetraspanin-18 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc08g077220.3.1 TOM2A, Solyc08g077220 TOM2A tobamovirus multiplication replication host factor 0.01 OrthoFinder output from all 47 species
Spa_g07255 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11017 TOM2A not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g11018 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24993 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001344_P001 Zm00001e001344 Tetraspanin-18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 16 132
No external refs found!