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Aliases : UPL1
Description : not classified & original description: none
Gene families : OG0001042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ehy_g10043 | |
| Cluster | HCCA: Cluster_79 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00033p00211330 | UPL1,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00204480 | UPL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.07 | OrthoFinder output from all 47 species | |
| AT1G55860 | UPL1 | ubiquitin-protein ligase 1 | 0.04 | OrthoFinder output from all 47 species | |
| AT1G70320 | UPL2 | ubiquitin-protein ligase 2 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g016298 | UPL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g077941 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g04900 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g16628 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06583 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g06863 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g14108 | UPL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g16302 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g40877 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g27017 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g18034 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g26360 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene10347.t1 | UPL1, Aspi01Gene10347 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0029.g024164 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: CDS=1-11178 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0087.g042300 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: CDS=382-11403 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0116.g046399 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: CDS=235-11562 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G067500.1 | UPL2, Ceric.10G067500 | E3 ubiquitin ligase *(UPL1) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G011900.1 | UPL1, Ceric.29G011900 | E3 ubiquitin ligase *(UPL1) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Cre01.g012450 | UPL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g02070 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12771 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04957 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009206001 | UPL2 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009208001 | UPL2 | E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01014697001 | UPL1 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01014698001 | UPL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_17424 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21632 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_26784 | UPL2 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g24080.1 | UPL2, LOC_Os12g24080 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g22981 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g23822 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05050 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_20049g0010 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
| MA_20049g0020 | UPL1 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_7295g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_7295g0020 | UPL2 | E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g21620.1 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g16120.1 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g48585 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g44293 | UPL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02429 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g06511 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g40563 | No alias | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g076620.4.1 | UPL1, Solyc04g076620 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g065630.4.1 | UPL1, Solyc07g065630 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g23911 | UPL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g21189 | UPL1 | E3 ubiquiTin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e009321_P001 | UPL1, Zm00001e009321 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e017836_P002 | UPL1, Zm00001e017836 | monomeric E3 ubiquitin ligase (HECT) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e039654_P001 | UPL1, Zm00001e039654 | monomeric E3 ubiquitin ligase (HECT) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1903293 | phosphatase complex | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |