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  5. Adi_g023010

Adi_g023010


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0002976 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002976_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g023010

Target Alias Description ECC score Gene Family Method Actions
Aob_g18005 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24672 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58569 No alias plastidial UMP kinase *(PUMPKIN) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26996 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g008850.3.1 Solyc09g008850 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 154 247
IPR001048 Asp/Glu/Uridylate_kinase 351 560
No external refs found!