Description : not classified & original description: none
Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00075p00159900 | evm_27.TU.AmTr_v1... | Increased DNA methylation 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Adi_g057776 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g13062 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g20182 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g20272 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g10962 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene25983.t1 | Aspi01Gene25983 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0049.g030786 | No alias | not classified & original description: CDS=1-5421 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0519.g075228 | No alias | not classified & original description: CDS=211-3699 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g31776 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ceric.04G075300.1 | Ceric.04G075300 | not classified & original description: pacid=50631416... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.19G070400.1 | Ceric.19G070400 | not classified & original description: pacid=50576012... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.35G031200.1 | Ceric.35G031200 | not classified & original description: pacid=50581090... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g09002 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g50149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g01772 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01014219001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01017972001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.03 | OrthoFinder output from all 47 species | |
Gb_41247 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g59510.1 | LOC_Os04g59510 | PHD finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g07690.1 | LOC_Os07g07690 | PHD finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Len_g17560 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g47387 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g02467 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_139275g0010 | No alias | PHD finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
MA_14500g0010 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.04 | OrthoFinder output from all 47 species | |
MA_22311g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Mp6g21090.2 | No alias | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Msp_g13348 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g13351 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g18818 | No alias | component *(IDM1) of ROS1-recruitment complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g06867 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g08484 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0245.g026694 | No alias | not classified & original description: CDS=519-4760 | 0.04 | OrthoFinder output from all 47 species | |
Sam_g15944 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g071550.3.1 | Solyc03g071550 | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g082040.2.1 | Solyc06g082040 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
Solyc09g076010.3.1 | Solyc09g076010 | PHD finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
Spa_g50990 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g21039 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e005667_P001 | Zm00001e005667 | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e012046_P003 | Zm00001e012046 | PHD finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032904_P002 | Zm00001e032904 | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003968 | RNA-dependent RNA polymerase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004527 | exonuclease activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |