Ehy_g10038


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g10038

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00075p00159900 evm_27.TU.AmTr_v1... Increased DNA methylation 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g057776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25983.t1 Aspi01Gene25983 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030786 No alias not classified & original description: CDS=1-5421 0.02 OrthoFinder output from all 47 species
Azfi_s0519.g075228 No alias not classified & original description: CDS=211-3699 0.03 OrthoFinder output from all 47 species
Cba_g31776 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G075300.1 Ceric.04G075300 not classified & original description: pacid=50631416... 0.03 OrthoFinder output from all 47 species
Ceric.19G070400.1 Ceric.19G070400 not classified & original description: pacid=50576012... 0.03 OrthoFinder output from all 47 species
Ceric.35G031200.1 Ceric.35G031200 not classified & original description: pacid=50581090... 0.05 OrthoFinder output from all 47 species
Dcu_g09002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014219001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.06 OrthoFinder output from all 47 species
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
Gb_41247 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.02 OrthoFinder output from all 47 species
LOC_Os04g59510.1 LOC_Os04g59510 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os07g07690.1 LOC_Os07g07690 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g17560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_139275g0010 No alias PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.04 OrthoFinder output from all 47 species
MA_22311g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g21090.2 No alias PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g13348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g06867 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0245.g026694 No alias not classified & original description: CDS=519-4760 0.04 OrthoFinder output from all 47 species
Sam_g15944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g071550.3.1 Solyc03g071550 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc09g076010.3.1 Solyc09g076010 PHD finger transcription factor 0.06 OrthoFinder output from all 47 species
Spa_g50990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005667_P001 Zm00001e005667 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e012046_P003 Zm00001e012046 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e032904_P002 Zm00001e032904 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 1181 1231
IPR008395 Agenet-like_dom 18 105
IPR019787 Znf_PHD-finger 1262 1303
No external refs found!