MA_10433178g0010


Description : pectin methylesterase


Gene families : OG_01_0000046 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000046_tree ,
OG_02_0000020 (LandPlants) Phylogenetic Tree(s): OG_02_0000020_tree ,
OG_03_0000014 (SeedPlants) Phylogenetic Tree(s): OG_03_0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433178g0010
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AT3G14300 PME26, ATPMEPCRC, ATPME26 pectinesterase family protein 0.02 Archaeplastida
AT4G02330 ATPMEPCRB Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
GSVIVT01012639001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_36005 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g15039.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g21034.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g57854.1 No alias pectin methylesterase 0.04 Archaeplastida
MA_161148g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_86577g0010 No alias pectin methylesterase 0.03 Archaeplastida
Pp3c18_170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c18_22120V3.1 No alias pectin methylesterase PCR fragment F 0.02 Archaeplastida
Smo89509 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Solyc01g057220.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc02g081990.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e035838_P001 No alias pectin methylesterase 0.02 Archaeplastida
AT3G10720 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT3G14300 PME26, ATPMEPCRC, ATPME26 pectinesterase family protein 0.02 LandPlants
AT4G02330 ATPMEPCRB Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
GSVIVT01012639001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
Gb_06356 No alias pectin methylesterase 0.02 LandPlants
LOC_Os01g15039.1 No alias pectin methylesterase 0.02 LandPlants
LOC_Os01g57854.1 No alias pectin methylesterase 0.04 LandPlants
Smo154356 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
Smo89509 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
Solyc01g057220.3.1 No alias pectin methylesterase 0.02 LandPlants
Solyc02g081990.3.1 No alias pectin methylesterase 0.03 LandPlants
AT3G10720 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 SeedPlants
GSVIVT01012639001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 SeedPlants
GSVIVT01027359001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
Gb_06356 No alias pectin methylesterase 0.02 SeedPlants
LOC_Os01g15039.1 No alias pectin methylesterase 0.02 SeedPlants
LOC_Os01g57854.1 No alias pectin methylesterase 0.04 SeedPlants
LOC_Os02g18650.1 No alias pectin methylesterase 0.01 SeedPlants
LOC_Os08g34900.1 No alias pectin methylesterase 0.01 SeedPlants
Solyc01g057220.3.1 No alias pectin methylesterase 0.02 SeedPlants
Solyc03g123630.4.1 No alias pectin methylesterase 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 58 206
IPR000070 Pectinesterase_cat 282 488
IPR000070 Pectinesterase_cat 489 538
No external refs found!