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  5. Adi_g022445

Adi_g022445


Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g022445

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00173360 CAMTA3, SR1,... RNA biosynthesis.transcriptional activation.CAMTA... 0.04 OrthoFinder output from all 47 species
AT4G16150 No alias calmodulin binding;transcription regulators 0.02 OrthoFinder output from all 47 species
Adi_g016712 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02392 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07423 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22501 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06503 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23903 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46224 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35291 No alias transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
LOC_Os07g43030.1 CAMTA3, SR1,... transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species
Len_g16770 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
MA_10434871g0010 No alias transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
MA_16615g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13205 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15357 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09186 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17074 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19783 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013495 No alias CAMTA-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Solyc05g015650.3.1 Solyc05g015650 transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species
Solyc12g099340.3.1 Solyc12g099340 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Zm00001e012888_P005 CAMTA3, SR1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Zm00001e035004_P001 Zm00001e035004 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Zm00001e035585_P001 CAMTA3, SR1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 635 725
IPR005559 CG-1_dom 22 134
IPR000048 IQ_motif_EF-hand-BS 870 888
IPR000048 IQ_motif_EF-hand-BS 846 864
No external refs found!