Solyc11g010570.2.1 (Solyc11g010570.2)


Aliases : Solyc11g010570.2

Description : 33.99 development.unspecified Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. SHORT VEGETATIVE PHASE (SVP)


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc11g010570.2.1
Cluster HCCA cluster: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT2G22630 AGL17 AGAMOUS-like 17 0.03 Gene family
AT4G24540 AGL24 AGAMOUS-like 24 0.13 Gene family
GSVIVT01008139001 No alias 33.99 development.unspecified Encodes a MADS box... 0.03 Gene family
GSVIVT01008140001 No alias 33.99 development.unspecified MADS box gene negatively... 0.04 Gene family
GSVIVT01008560001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01012250001 No alias 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
GSVIVT01018446001 No alias No description available 0.02 Gene family
GSVIVT01018450001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
GSVIVT01027579001 No alias No description available 0.05 Gene family
LOC_Os02g01355 Os02g0104100,... No description available 0.02 Gene family
LOC_Os08g41950 Os08g0531700 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
LOC_Os12g31748 Os12g0501700 33.99 development.unspecified MADS box gene negatively... 0.04 Gene family
MA_101463g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
MA_13933g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
MA_19387g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
MA_4126137g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc10g017630.2.1 Solyc10g017630.2 No description available 0.05 Gene family
Zm00001d007949 GRMZM2G148693 33.99 development.unspecified Floral homeotic gene... 0.08 Gene family
Zm00001d008882 GRMZM2G359952 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
Zm00001d013259 GRMZM2G553379 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
Zm00001d015381 GRMZM2G130382 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d018142 GRMZM2G046885 33.99 development.unspecified Encodes a nuclear protein... 0.03 Gene family
Zm00001d018667 GRMZM2G072582 33.99 development.unspecified MADS box gene negatively... 0.05 Gene family
Zm00001d031620 GRMZM2G159397 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d039434 GRMZM2G471089 33.99 development.unspecified Floral homeotic gene... 0.04 Gene family
Zm00001d041781 GRMZM2G160687 33.99 development.unspecified AGAMOUS [AG]-like MADS box... 0.03 Gene family
Zm00001d044899 GRMZM5G814279 No description available 0.03 Gene family
Zm00001d052180 GRMZM2G370777 33.99 development.unspecified Encodes a nuclear protein... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 92 171
No external refs found!