1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g021410

Adi_g021410 (ATVAMP711, VAMP711)


Aliases : ATVAMP711, VAMP711

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0002036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g021410

Target Alias Description ECC score Gene Family Method Actions
AT4G32150 ATVAMP711, VAMP711 vesicle-associated membrane protein 711 0.02 OrthoFinder output from all 47 species
Aev_g05769 ATVAMP711, VAMP711 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Aob_g08818 ATVAMP712, VAMP712 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Cba_g10299 ATVAMP711, VAMP711 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Cre06.g278172 ATVAMP711, VAMP711 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
Ehy_g03359 VAMP714, ATVAMP714 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Ehy_g17900 ATVAMP711, VAMP711 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
GSVIVT01035876001 ATVAMP711, VAMP711 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
LOC_Os06g07780.1 ATVAMP711,... VAMP7-type R-type SNARE longin protein 0.05 OrthoFinder output from all 47 species
Solyc06g074250.3.1 VAMP714,... VAMP7-type R-type SNARE longin protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 29 108
IPR042855 V_SNARE_CC 124 211
No external refs found!