Solyc11g008470.2.1 (Solyc11g008470.2)


Aliases : Solyc11g008470.2

Description : 34.3 transport.amino acids Transmembrane amino acid transporter family protein


Gene families : OG_01_0003023 (Gene family) Phylogenetic Tree(s): OG0003023_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc11g008470.2.1
Cluster HCCA cluster: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT5G16780 MDF, DOT2 SART-1 family 0.04 Gene family
Cre03.g156100 No alias 33.99 development.unspecified Encodes a protein... 0.02 Gene family
GSVIVT01035173001 No alias 33.99 development.unspecified Encodes a protein... 0.06 Gene family
LOC_Os02g30730 Os02g0511500 33.99 development.unspecified Encodes a protein... 0.06 Gene family
Smo404232 PACid_15408567 No description available 0.03 Gene family
Solyc01g099380.3.1 Solyc01g099380.3 33.99 development.unspecified Encodes a protein... 0.01 Gene family
Zm00001d042058 GRMZM2G109284 33.99 development.unspecified Encodes a protein... 0.16 Gene family

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 497 579
IPR005011 SNU66/SART1 1248 1296
IPR005011 SNU66/SART1 769 1236
IPR013057 AA_transpt_TM 132 461
No external refs found!