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Description : snRNP-associated protein *(SR140) & original description: none
Gene families : OG0003274 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003274_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ehy_g09866 | |
| Cluster | HCCA: Cluster_79 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00064p00173090 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21519 | No alias | snRNP-associated protein *(SR140) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G097400.1 | Ceric.14G097400 | snRNP-associated protein *(SR140) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cre03.g158150 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g10046 | No alias | snRNP-associated protein *(SR140) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g26474 | No alias | snRNP-associated protein *(SR140) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_01264 | No alias | snRNP-associated protein (SR140) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_20698 | No alias | Protein RRC1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g17130.1 | No alias | snRNP-associated protein (SR140) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g14289 | No alias | snRNP-associated protein *(SR140) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g09321 | No alias | snRNP-associated protein *(SR140) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08483 | No alias | snRNP-associated protein *(SR140) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g07962 | No alias | snRNP-associated protein *(SR140) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013828_P003 | Zm00001e013828 | snRNP-associated protein (SR140) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013170 | mRNA_splic_Cwf21_dom | 288 | 328 |
| No external refs found! |