Solyc11g008140.2.1 (Solyc11g008140.2)


Aliases : Solyc11g008140.2

Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases Pectin lyase-like superfamily protein


Gene families : OG_01_0000238 (Gene family) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc11g008140.2.1
Cluster HCCA cluster: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000592001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family
GSVIVT01007582001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
GSVIVT01008053001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
GSVIVT01014682001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
GSVIVT01020067001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
GSVIVT01020068001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
LOC_Os06g05209 Os06g0144200 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
LOC_Os06g05260 Os06g0144900 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
MA_103716g0010 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
MA_10430145g0020 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Smo407495 PACid_15419124 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Solyc09g091430.3.1 Solyc09g091430.3 10.6.3 cell wall.degradation.pectate lyases and... 0.06 Gene family
Zm00001d004448 GRMZM2G131912 10.6.3 cell wall.degradation.pectate lyases and... 0.05 Gene family
Zm00001d032806 GRMZM2G472060 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Zm00001d036158 GRMZM2G364349 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002022 Pec_lyase 202 385
No external refs found!