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  5. Ehy_g09837

Ehy_g09837 (MBD05, MBD5, ATMBD5)


Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g09837

Target Alias Description ECC score Gene Family Method Actions
Adi_g036637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058770 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27247 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15671 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g024028 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: CDS=264-1880 0.02 OrthoFinder output from all 47 species
Ceric.08G019600.1 ATMBD6, MBD6,... not classified & original description: pacid=50637929... 0.03 OrthoFinder output from all 47 species
Nbi_g01230 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05822 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28701 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002716 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=802-2949 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015792 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=471-2042 0.04 OrthoFinder output from all 47 species
Sam_g19246 No alias methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g080690.4.1 Solyc08g080690 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 169 219
No external refs found!