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Description : not classified & original description: none
Gene families : OG0000608 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000608_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00101p00028940 | evm_27.TU.AmTr_v1... | RNA processing.RNA decay.deadenylation-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g020043 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g055478 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g02092 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g06975 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene62010.t2 | Aspi01Gene62010 | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13843 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000498.93 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Cre10.g441200 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g07463 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05816 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g30029 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07940 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_28833 | No alias | XRN4-exoribonuclease cofactor (LARP1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g16110.1 | LOC_Os01g16110 | XRN4-exoribonuclease cofactor (LARP1) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g36920.1 | LOC_Os09g36920 | La-related protein 1B OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07864 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| MA_114481g0010 | No alias | La-related protein 1B OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g44181 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g27548 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27980 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g081820.3.1 | Solyc04g081820 | La-related protein 1C OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g073550.3.1 | Solyc06g073550 | XRN4-exoribonuclease cofactor (LARP1) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011617_P001 | Zm00001e011617 | La-related protein 1B OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025537_P001 | Zm00001e025537 | XRN4-exoribonuclease cofactor (LARP1) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |