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  5. Adi_g019672

Adi_g019672


Description : RAB5 canonical effector *(EREX) & original description: none


Gene families : OG0002176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g019672

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00116090 evm_27.TU.AmTr_v1... PX domain-containing protein EREL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g15358 No alias RAB5 canonical effector *(EREX) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035873001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.05 OrthoFinder output from all 47 species
Lfl_g05595 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
MA_7797822g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g042130.2.1 Solyc08g042130 canonical RAB5 effector (EREX) 0.02 OrthoFinder output from all 47 species
Zm00001e030469_P004 Zm00001e030469 canonical RAB5 effector (EREX) 0.03 OrthoFinder output from all 47 species
Zm00001e037488_P001 Zm00001e037488 canonical RAB5 effector (EREX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
InterPro domains Description Start Stop
IPR001683 PX_dom 68 145
No external refs found!