- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : GARP subgroup HHO transcription factor & original description: none
Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G13300 | HRS1 | myb-like transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G03500 | No alias | Homeodomain-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G25790 | No alias | myb-like transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g23352 | No alias | GARP subgroup HHO transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g30627 | No alias | GARP subgroup HHO transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0092.g042967 | No alias | GARP subgroup HHO transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g22464 | No alias | GARP subgroup HHO transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.21G045700.1 | Ceric.21G045700 | GARP subgroup HHO transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g03915 | No alias | GARP subgroup HHO transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01015462001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01031804001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g08160.1 | LOC_Os01g08160 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g03168 | No alias | GARP subgroup HHO transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g03258 | No alias | GARP subgroup HHO transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g40586 | No alias | GARP subgroup HHO transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g25323 | No alias | GARP subgroup HHO transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g33222 | No alias | GARP subgroup HHO transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g14104 | No alias | GARP subgroup HHO transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g05162 | No alias | GARP subgroup HHO transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g29341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37435 | No alias | GARP subgroup HHO transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g006800.2.1 | Solyc12g006800 | G2-like GARP transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g55258 | No alias | GARP subgroup HHO transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g05995 | No alias | GARP subgroup HHO transcription factor & original... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006576 | biogenic amine metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0009309 | amine biosynthetic process | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0030410 | nicotianamine synthase activity | IEP | HCCA |
| BP | GO:0030417 | nicotianamine metabolic process | IEP | HCCA |
| BP | GO:0030418 | nicotianamine biosynthetic process | IEP | HCCA |
| BP | GO:0042401 | biogenic amine biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0072351 | tricarboxylic acid biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |