Solyc11g006050.1.1 (Solyc11g006050.1)


Aliases : Solyc11g006050.1

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc11g006050.1.1
Cluster HCCA cluster: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
GSVIVT01008649001 No alias No description available 0.03 Gene family
GSVIVT01018270001 No alias No description available 0.03 Gene family
GSVIVT01018271001 No alias No description available 0.02 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
GSVIVT01022277001 No alias No description available 0.02 Gene family
GSVIVT01032961001 No alias No description available 0.04 Gene family
GSVIVT01032983001 No alias No description available 0.03 Gene family
GSVIVT01035502001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g13710 Os02g0231000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os03g05590 Os03g0150200 No description available 0.01 Gene family
LOC_Os03g08490 Os03g0183200 No description available 0.02 Gene family
LOC_Os03g64260 Os03g0860100 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g47590 Os06g0691100 No description available 0.02 Gene family
LOC_Os10g38000 Os10g0523900 No description available 0.02 Gene family
LOC_Os10g41330 Os10g0562900 No description available 0.02 Gene family
MA_179692g0020 No alias No description available 0.02 Gene family
MA_27309g0010 No alias No description available 0.02 Gene family
MA_314205g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_5530g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_9321671g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_9905g0010 No alias No description available 0.03 Gene family
Smo409196 PACid_15422590 No description available 0.02 Gene family
Solyc02g077370.1.1 Solyc02g077370.1 No description available 0.03 Gene family
Solyc03g118190.3.1 Solyc03g118190.3 No description available 0.02 Gene family
Solyc04g080910.1.1 Solyc04g080910.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc05g050790.2.1 Solyc05g050790.2 No description available 0.02 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.02 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.02 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.02 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.04 Gene family
Zm00001d018288 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d035835 GRMZM2G135452 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Zm00001d042593 GRMZM2G307152 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d043491 GRMZM2G474326 No description available 0.03 Gene family
Zm00001d051350 GRMZM2G048621 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 63 113
No external refs found!