Solyc11g005700.1.1 (Solyc11g005700.1)


Aliases : Solyc11g005700.1

Description : 27.3.64 RNA.regulation of transcription.PHOR1 "CYS, MET, PRO, and GLY protein 2" (CMPG2)


Gene families : OG_01_0000079 (Gene family) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc11g005700.1.1
Cluster HCCA cluster: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT3G52450 PUB22 plant U-box 22 0.02 Gene family
Cre10.g444100 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
GSVIVT01011139001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
GSVIVT01011140001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
LOC_Os02g33680 Os02g0540700 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
LOC_Os04g34140 Os04g0418500 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
LOC_Os12g06410 Os12g0161100 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
MA_10432981g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
MA_84154g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.02 Gene family
MA_8837995g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.03 Gene family
Solyc09g025270.3.1 Solyc09g025270.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM... 0.03 Gene family
Zm00001d016719 GRMZM2G303964 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
Zm00001d016730 GRMZM2G071484 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
Zm00001d025379 GRMZM2G059042 27.3.64 RNA.regulation of transcription.PHOR1 "CYS, MET,... 0.05 Gene family
Zm00001d042738 GRMZM2G135713 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 10 79
No external refs found!