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  5. Adi_g018593

Adi_g018593


Description : not classified & original description: none


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g018593

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00144160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
AT1G32360 No alias Zinc finger (CCCH-type) family protein 0.02 OrthoFinder output from all 47 species
Adi_g101999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24288 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Als_g07773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01754 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aob_g04427 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010092 No alias not classified & original description: CDS=156-1769 0.03 OrthoFinder output from all 47 species
Cre11.g476200 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g28420 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Dcu_g17295 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Len_g27954 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Lfl_g01628 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Lfl_g16999 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Lfl_g40942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19465 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ore_g29816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30390 No alias regulatory protein of RNA homeostasis & original... 0.06 OrthoFinder output from all 47 species
Ore_g32193 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g05281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0199.g025558 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sam_g09323 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g24728 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Spa_g15252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28121 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11119 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Zm00001e025892_P001 Zm00001e025892 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR041367 Znf-CCCH_4 199 220
IPR000571 Znf_CCCH 138 163
No external refs found!