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  5. Adi_g017782

Adi_g017782 (APUM4, PUM4)


Aliases : APUM4, PUM4

Description : not classified & original description: none


Gene families : OG0000583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g017782

Target Alias Description ECC score Gene Family Method Actions
Gb_30040 APUM6, PUM6 Pumilio homolog 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g40830.1 LOC_Os08g40830 Pumilio homolog 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10159883g0010 PUM5, APUM5 Pumilio homolog 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g43012 APUM2, PUM2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c8_2770V3.1 PUM1, APUM1, Pp3c8_2770 pumilio 1 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006119 No alias phospholipase-A1 *(PC-PLA1) & original description: CDS=1-4779 0.02 OrthoFinder output from all 47 species
Smo86145 APUM4, PUM4 Pumilio homolog 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Zm00001e016242_P002 PUM1, APUM1,... Pumilio homolog 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 11 40
IPR001313 Pumilio_RNA-bd_rpt 43 77
IPR001313 Pumilio_RNA-bd_rpt 88 118
No external refs found!