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  5. Adi_g017665

Adi_g017665


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g017665

Target Alias Description ECC score Gene Family Method Actions
Adi_g057577 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g11835 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g12428 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g13064 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aob_g04391 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38602 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42025.t1 HRS1, Aspi01Gene42025 GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene59765.t1 Aspi01Gene59765 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007690 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g11944 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g36929 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g14657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g04920 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06852 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g25820.2 LOC_Os08g25820 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g02992 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_118174g0010 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g24104 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g00872 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12621 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g55133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22170 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015782 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0183.g024956 No alias not classified & original description: CDS=676-2103 0.02 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g51060 No alias GARP subgroup PHL transcription factor & original... 0.09 OrthoFinder output from all 47 species
Spa_g56754 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 24 74
No external refs found!